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Current Result Document :
ÇѱÛÁ¦¸ñ(Korean Title) |
ºÐ»êº´·Ä Ŭ·¯½ºÅ͸¦ ÀÌ¿ëÇÑ GVCF(Genome Variant Call Format) ÆÄÀÏ Á¤·Ä/º´ÇÕ |
¿µ¹®Á¦¸ñ(English Title) |
GVCF(Genome Variant Call Format) File Sort/Merge using the Parallel and Distributed Cluster Computing |
ÀúÀÚ(Author) |
ÀÌÁø¿ì
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À±ÁöÈñ
JinWoo Lee
JungIm Won
JeeHee Yoon
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¿ø¹®¼ö·Ïó(Citation) |
VOL 47 NO. 01 PP. 0112 ~ 0114 (2020. 07) |
Çѱ۳»¿ë (Korean Abstract) |
ÃÖ±Ù Â÷¼¼´ë ½ÃÄö½Ì (next generation sequencing, NGS) ±â¹ýÀÇ ¹ß´Þ·Î ÀÎÇÏ¿©, ¹æ´ëÇÑ À¯Àüü µ¥ÀÌÅÍ°¡ »ý»ê/ÃàÀûµÇ°í ÀÖÀ¸¸ç, ÀÌµé µ¥ÀÌÅÍÀÇ ºÐ»ê/º´·Ä 󸮰¡ ÇʼöÀûÀÎ ¹æ¹ý·ÐÀ¸·Î ´ëµÎµÇ°í ÀÖ´Ù. NGS µ¥ÀÌÅÍ Ã³¸®´Â BAM Æ÷¸ËÀÇ ¸®µå Á¤·Ä °á°ú ÃßÃâ, gVCF/VCF Æ÷¸ËÀÇ º¯ÀÌ °á°ú ÃßÃâ µîÀÇ °úÁ¤ÀÌ Ç¥ÁØȵǰí ÀÖÀ¸³ª, ´Ü°èº° °úÁ¤Àº µ¥ÀÌÅÍ ±Ô¸ð·Î ÀÎÇÏ¿© ¸Å¿ì ±ä ½ÇÇà ½Ã°£À» ÇÊ¿ä·Î ÇÑ´Ù. º» ¿¬±¸¿¡¼´Â ÄÚȣƮ ºÐ¼®À» À§ÇÏ¿© ´Ù¼öÀÇ °³Àκ°·Î »ý¼ºµÈ º¯ÀÌ Á¤º¸ ÆÄÀÏ (gVCF ÆÄÀÏ)À» Á¤·Ä/º´ÇÕÇÏ¿© ´ÜÀÏ º¯ÀÌ Á¤º¸ ÆÄÀÏÀ» »ý¼ºÇÏ´Â Apache SparkÀÇ ºÐ»ê/º´·Äȸ¦ Àû¿ëÇÑ gVCFÆÄÀÏ Á¤·Ä/º´ÇÕ ¸ðµâÀ» Á¦¾ÈÇÑ´Ù. Á¦¾ÈµÈ ¹æ½ÄÀÇ À¯È¿¼ºÀ» ÀÔÁõÇϱâ À§ÇÏ¿© ±âÁ¸ÀÇ GATKÀÇ ¡°CombineGVCFs¡± ¸ðµâ°ú ºñ±³ ½ÇÇèÀ» ¼öÇàÇÏ¿´À¸¸ç, ±× °á°ú Á¦¾ÈµÈ ¹æ½ÄÀÇ ½ÇÇà ½Ã°£ÀÌ ±âÁ¸ÀÇ ÀÇ GATK ¡°CombineGVCFs¡± ¸ðµâ¿¡ ºñÇÏ¿© ÃÖ¼Ò ¿¡¼ ÃÖ´ë ´ÜÃà 75% 87%µÈ °ÍÀ» È®ÀÎÇÏ¿´´Ù. |
¿µ¹®³»¿ë (English Abstract) |
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Å°¿öµå(Keyword) |
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